BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026C06SP1|AL428519
(851 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1616 1614 0.0
>3x_Contig1616
Length = 10468
Score = 1614 bits (805), Expect = 0.0
Identities = 833/851 (97%), Gaps = 1/851 (0%)
Strand = Plus / Plus
Query: 1 aatggaaaactggtggtagtactaaactgaaagatacaattcaatcagctcttttaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8885 aatggaaaactggtggtagtactaaactgaaagatacaattcaatcagctcttttaaaac 8944
Query: 61 aaactagcgaatgcctttcgctggtttaccatatttactcctcttatattgcactggggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8945 aaactagcgaatgcctttcgctggtttaccatatttactcctcttatattgcactggggt 9004
Query: 121 ctccgtatcaacttaatattgatcataacgttagagaaacaattactggaataatattcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9005 ctccgtatcaacttaatattgatcataacgttagagaaacaattactggaataatattcc 9064
Query: 181 accctcagtctccaactaaaactgcgttcgacacttcaggcaaggaaaattgttcaagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9065 accctcagtctccaactaaaactgcgttcgacacttcaggcaaggaaaattgttcaagag 9124
Query: 241 ccatttcggatgcatctgttaatagacccttaagcctcgatcctgctgcccggaagaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9125 ccatttcggatgcatctgttaatagacccttaagcctcgatcctgctgcccggaagaaat 9184
Query: 301 gcgtggagcataaagtacaatcccatagtaacacgtcaatgccattggcgccgacacctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9185 gcgtggagcataaagtacaatcccatagtaacacgtcaatgccattggcgccgacacctc 9244
Query: 361 ttaataagggtactgagtcatacgtcattattcatgctatatcaatgttgaaggatttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9245 ttaataagggtactgagtcatacgtcattattcatgctatatcaatgttgaaggatttgt 9304
Query: 421 atcagttactggaaaaaatcagaaataccgtatttdtcatgatgaagaacgactctttgc 480
||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9305 atcagttactggagaaaataagaaataccgtatttatcatgatgaagaacgactctttgc 9364
Query: 481 ccaaattcctggcaacagaatcgtatagggacgcaatttcattwatwactgctaacaagt 540
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 9365 ccaaattcctggcaacagaatcgtatagggacgcaatttcattaataactgctaacaagt 9424
Query: 541 agaacctaggcatttcatcatgaagaataaagatattcatcttgcaaaagaatgtggcct 600
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 9425 agaacctaggcatttcatcatgaagaataaagatattcatc-tgcaaaagaatgtggcct 9483
Query: 601 tttctaccaagaaaatggaacattaatgtgacaatatatwcatatagacatatatamvmb 660
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 9484 tttctaccaagaaaatggaacattaatgtgacaatatatacatatagacatatataaaat 9543
Query: 661 cmtttwgttwatttwcagattaagcgattggktcaagagtggtacccttcttgatagtag 720
| ||| ||| |||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 9544 catttagttaatttacagattaagcgattggttcaagagtggtacccttcttgatagtag 9603
Query: 721 cccaaccaattaaacgccaatgcttttcgatacgtctagataatgcaatcttttcattwa 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 9604 cccaaccaattaaacgccaatgcttttcgatacgtctagataatgcaatcttttcattaa 9663
Query: 781 cttctgtacatgcaggggaagttaattgtratcttgccatatcggctttgacggcaacca 840
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9664 cttctgtacatgcaggggaagttaattgtaatcttgccatatcggctttgacggcaacca 9723
Query: 841 cacgggcacca 851
|||||||||||
Sbjct: 9724 cacgggcacca 9734
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5241
Number of Sequences: 1807
Number of extensions: 5241
Number of successful extensions: 119
Number of sequences better than 1.0e-20: 1
length of query: 851
length of database: 10,358,551
effective HSP length: 16
effective length of query: 835
effective length of database: 10,329,639
effective search space: 8625248565
effective search space used: 8625248565
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)